STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEH63952.1Transporter, betaine/carnitine/choline family; COG: COG1292; Pfam: PF02028; InterPro: IPR000060; Belongs to the BCCT transporter (TC 2.A.15) family. (644 aa)    
Predicted Functional Partners:
cah
Carbonate dehydratase; COG: COG0288; Pfam: PF00484; InterPro: IPR001765.
       0.610
EEH63954.1
Putative arginase; COG: COG0010; Pfam: PF00491; InterPro: IPR006035; Belongs to the arginase family.
       0.566
EEH63951.1
FemAB family protein; Pfam: PF02388; InterPro: IPR016181.
       0.516
Your Current Organism:
Gleimia coleocanis
NCBI taxonomy Id: 525245
Other names: Actinomyces coleocanis DSM 15436, Actinomyces coleocanis str. DSM 15436, Actinomyces coleocanis strain DSM 15436, G. coleocanis DSM 15436, Gleimia coleocanis DSM 15436
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.