STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEH64067.1Peptidase family M3; COG: COG0339; Pfam: PF01432; InterPro: IPR001567. (660 aa)    
Predicted Functional Partners:
EEH64066.1
Hypothetical protein.
       0.773
EEH64065.1
DsbA-like protein; COG: COG2761; Pfam: PF01323; InterPro: IPR001853.
       0.737
gltX
glutamate--tRNA ligase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.
   
  
 0.690
EEH64064.1
Hypothetical protein.
       0.523
EEH64068.1
Hypothetical protein.
       0.489
EEH63882.1
Hydrolase, alpha/beta domain protein; COG: COG0657; Pfam: PF07859; InterPro: IPR013094.
     
 0.465
EEH63402.1
LPXTG-motif cell wall anchor domain protein; COG: COG2374; Pfam: PF03372,PF00746; InterPro: IPR005135.
 
     0.423
Your Current Organism:
Gleimia coleocanis
NCBI taxonomy Id: 525245
Other names: Actinomyces coleocanis DSM 15436, Actinomyces coleocanis str. DSM 15436, Actinomyces coleocanis strain DSM 15436, G. coleocanis DSM 15436, Gleimia coleocanis DSM 15436
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.