STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEH63593.1Vitamin K epoxide reductase family; Pfam: PF07884; InterPro: IPR012932. (203 aa)    
Predicted Functional Partners:
EEH63592.1
Iron dependent repressor DNA binding domain protein; COG: COG1321; Pfam: PF01325,PF02742,PF04023; InterPro: IPR001367.
       0.804
EEH63442.1
Hypothetical protein.
  
     0.610
rpsD
Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
 
     0.500
EEH63814.1
Hypothetical protein.
  
   
 0.498
EEH64479.1
Hypothetical protein.
  
  
 0.473
EEH63230.1
DsbA-like protein; COG: COG1651; Pfam: PF01323; InterPro: IPR012335.
  
  
 0.473
EEH63450.1
Acetyltransferase, GNAT family; Pfam: PF00583; InterPro: IPR016181.
  
     0.446
EEH64141.1
Hypothetical protein; COG: COG1507; Pfam: PF04417; InterPro: IPR007511.
  
     0.406
Your Current Organism:
Gleimia coleocanis
NCBI taxonomy Id: 525245
Other names: Actinomyces coleocanis DSM 15436, Actinomyces coleocanis str. DSM 15436, Actinomyces coleocanis strain DSM 15436, G. coleocanis DSM 15436, Gleimia coleocanis DSM 15436
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.