Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EEH63243.1 | EEH63244.1 | HMPREF0044_1482 | HMPREF0044_1483 | RNA methyltransferase, TrmH family, group 3; COG: COG0566; Pfam: PF08032,PF00588; InterPro: IPR004441; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | Na+/H+ antiporter family protein; COG: COG2056; Pfam: PF03553; InterPro: IPR004770. | 0.554 |
EEH63244.1 | EEH63243.1 | HMPREF0044_1483 | HMPREF0044_1482 | Na+/H+ antiporter family protein; COG: COG2056; Pfam: PF03553; InterPro: IPR004770. | RNA methyltransferase, TrmH family, group 3; COG: COG0566; Pfam: PF08032,PF00588; InterPro: IPR004441; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | 0.554 |
EEH63244.1 | putP | HMPREF0044_1483 | HMPREF0044_1484 | Na+/H+ antiporter family protein; COG: COG2056; Pfam: PF03553; InterPro: IPR004770. | Sodium/proline symporter; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.455 |
putP | EEH63244.1 | HMPREF0044_1484 | HMPREF0044_1483 | Sodium/proline symporter; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | Na+/H+ antiporter family protein; COG: COG2056; Pfam: PF03553; InterPro: IPR004770. | 0.455 |