STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEH63265.1ABC transporter, ATP-binding protein; COG: COG1136; Pfam: PF00005; InterPro: IPR003593. (299 aa)    
Predicted Functional Partners:
EEH63216.1
Efflux ABC transporter, permease protein; Pfam: PF02687; InterPro: IPR003838.
 0.955
EEH64487.1
Efflux ABC transporter, permease protein; Pfam: PF02687; InterPro: IPR003838.
  0.943
EEH63922.1
Efflux ABC transporter, permease protein; COG: COG0577; Pfam: PF02687; InterPro: IPR003838.
  
  0.942
EEH63266.1
Hypothetical protein.
 
  0.913
EEH63771.1
Efflux ABC transporter, permease protein; Pfam: PF02687.
  
  0.865
EEH64036.1
ABC transporter, permease protein; COG: COG0765; Pfam: PF00528; InterPro: IPR000515.
 
 
 
  0.850
EEH63218.1
Hypothetical protein.
  
 
 0.767
EEH63264.1
Hypothetical protein.
       0.675
EEH63938.1
ABC transporter, ATP-binding protein; COG: COG1131; Pfam: PF00005; InterPro: IPR003439.
 
  
  0.641
pheS
phenylalanine--tRNA ligase, alpha subunit; COG: COG0016; Pfam: PF02912,PF01409; InterPro: IPR004529; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.
 
 
   0.573
Your Current Organism:
Gleimia coleocanis
NCBI taxonomy Id: 525245
Other names: Actinomyces coleocanis DSM 15436, Actinomyces coleocanis str. DSM 15436, Actinomyces coleocanis strain DSM 15436, G. coleocanis DSM 15436, Gleimia coleocanis DSM 15436
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.