STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEI87172.1ABC transporter, ATP-binding protein; COG: COG1136; Pfam: PF00005; InterPro: IPR003439. (239 aa)    
Predicted Functional Partners:
EEI87170.1
Efflux ABC transporter, permease protein; COG: COG0577; Pfam: PF02687; InterPro: IPR003838.
 
 
 0.984
EEI87171.1
Efflux ABC transporter, permease protein; Pfam: PF02687; InterPro: IPR003838.
 
 
 0.984
EEI87174.1
Efflux ABC transporter, permease protein; Pfam: PF02687; InterPro: IPR003838.
 
 
 0.970
EEI87217.1
Efflux ABC transporter, permease protein; COG: COG0577; Pfam: PF02687; InterPro: IPR003838.
  
 0.970
EEI87169.1
Hypothetical protein; COG: COG4393.
 
    0.946
EEI87173.1
Hypothetical protein; Pfam: PF04205.
 
     0.916
EEI87167.1
Iron permease FTR1 family; COG: COG0672; Pfam: PF03239.
 
     0.895
EEI87168.1
Hypothetical protein; COG: COG3470.
 
     0.894
EEI87165.1
Hypothetical protein.
 
    0.858
EEI86659.1
ABC transporter, permease protein; COG: COG0765; Pfam: PF00497,PF00528; InterPro: IPR001638.
   
 0.735
Your Current Organism:
Anaerococcus lactolyticus
NCBI taxonomy Id: 525254
Other names: A. lactolyticus ATCC 51172, Anaerococcus lactolyticus ATCC 51172, Anaerococcus lactolyticus str. ATCC 51172, Anaerococcus lactolyticus strain ATCC 51172
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.