STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEI86679.1Hypothetical protein. (40 aa)    
Predicted Functional Partners:
hydE
Iron-only hydrogenase maturation rSAM protein HydE; COG: COG0502; Pfam: PF04055; InterPro: IPR005244.
       0.492
hydF
Hydrogenase maturation GTPase HydF; Pfam: PF01926; InterPro: IPR005225.
       0.425
hydG
Iron-only hydrogenase maturation rSAM protein HydG; COG: COG1060; Pfam: PF04055,PF06968; InterPro: IPR013785.
       0.425
Your Current Organism:
Anaerococcus lactolyticus
NCBI taxonomy Id: 525254
Other names: A. lactolyticus ATCC 51172, Anaerococcus lactolyticus ATCC 51172, Anaerococcus lactolyticus str. ATCC 51172, Anaerococcus lactolyticus strain ATCC 51172
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.