STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEI86709.1ABC transporter, ATP-binding protein; COG: COG1136; Pfam: PF00005; InterPro: IPR003439. (229 aa)    
Predicted Functional Partners:
EEI87217.1
Efflux ABC transporter, permease protein; COG: COG0577; Pfam: PF02687; InterPro: IPR003838.
 
 0.974
EEI86710.1
Efflux ABC transporter, permease protein; Pfam: PF02687.
 
 
 0.950
EEI86708.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Pfam: PF00512,PF02518; InterPro: IPR003594.
 
 
   0.821
EEI87171.1
Efflux ABC transporter, permease protein; Pfam: PF02687; InterPro: IPR003838.
 
 0.795
EEI87170.1
Efflux ABC transporter, permease protein; COG: COG0577; Pfam: PF02687; InterPro: IPR003838.
  
 0.762
EEI85402.1
Hypothetical protein.
  
 0.739
EEI86659.1
ABC transporter, permease protein; COG: COG0765; Pfam: PF00497,PF00528; InterPro: IPR001638.
   
 0.735
EEI86746.1
Hypothetical protein; COG: COG0577; Pfam: PF02687.
  
 0.662
EEI87209.1
Efflux ABC transporter, permease protein; Pfam: PF02687.
 
 
 0.660
EEI85487.1
Efflux ABC transporter, permease protein; Pfam: PF02687; InterPro: IPR003838.
 
 
 0.645
Your Current Organism:
Anaerococcus lactolyticus
NCBI taxonomy Id: 525254
Other names: A. lactolyticus ATCC 51172, Anaerococcus lactolyticus ATCC 51172, Anaerococcus lactolyticus str. ATCC 51172, Anaerococcus lactolyticus strain ATCC 51172
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.