STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
arcAPutative arginine deiminase; COG: COG2235; Pfam: PF02274; InterPro: IPR003876. (403 aa)    
Predicted Functional Partners:
argF
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
 
 
 0.993
argF-2
Ornithine carbamoyltransferase; COG: COG0078; Pfam: PF02729,PF00185; InterPro: IPR002292.
 
 
 0.982
arcC
Carbamate kinase; COG: COG0549; Pfam: PF00696; InterPro: IPR003964; Belongs to the carbamate kinase family.
 
  
 0.958
argH
Argininosuccinate lyase; COG: COG0165; Pfam: PF00206; InterPro: IPR009049.
     
 0.866
argG
Argininosuccinate synthase; COG: COG0137; Pfam: PF00764; InterPro: IPR001518; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
     
 0.862
EEI85265.1
Orn/Lys/Arg decarboxylase, major domain protein; COG: COG1982; Pfam: PF01276,PF03711; InterPro: IPR015421.
    
 0.775
EEI86623.1
Hypothetical protein.
    
 0.663
EEI86955.1
Acetyltransferase, GNAT family; Pfam: PF00583.
     
  0.623
EEI86614.1
Hypothetical protein.
       0.618
EEI86397.1
Hypothetical protein; COG: COG1915.
    
  0.534
Your Current Organism:
Anaerococcus lactolyticus
NCBI taxonomy Id: 525254
Other names: A. lactolyticus ATCC 51172, Anaerococcus lactolyticus ATCC 51172, Anaerococcus lactolyticus str. ATCC 51172, Anaerococcus lactolyticus strain ATCC 51172
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.