STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEI86485.1ABC transporter, permease protein; COG: COG1175; Pfam: PF00528; InterPro: IPR000515. (678 aa)    
Predicted Functional Partners:
ugpC
ABC transporter, ATP-binding protein; COG: COG3839; Pfam: PF00005,PF08402; InterPro: IPR003439; Belongs to the ABC transporter superfamily.
 
 0.999
EEI86484.1
ABC transporter, permease protein; COG: COG3833; Pfam: PF00528; InterPro: IPR000515.
 
 0.999
EEI86487.1
ABC transporter, solute-binding protein; Pfam: PF01547.
 
 0.999
EEI85811.1
ABC transporter, permease protein; COG: COG0395; Pfam: PF00528; InterPro: IPR000515.
 
 0.994
EEI85809.1
ABC transporter, ATP-binding protein; COG: COG3839; Pfam: PF00005,PF08402; InterPro: IPR003593; Belongs to the ABC transporter superfamily.
 
 0.993
EEI85812.1
ABC transporter, solute-binding protein; Pfam: PF01547; InterPro: IPR006059.
 
 0.980
EEI86628.1
Hypothetical protein; Pfam: PF01547.
  
 0.967
EEI86486.1
Hypothetical protein.
       0.811
amyB
Alpha amylase, catalytic domain protein; COG: COG0366; Pfam: PF02903,PF00128; InterPro: IPR013781; Belongs to the glycosyl hydrolase 13 family.
 
  
 0.741
treA
Alpha amylase, catalytic domain protein; COG: COG0366; Pfam: PF00128; InterPro: IPR013781.
 
  
 0.656
Your Current Organism:
Anaerococcus lactolyticus
NCBI taxonomy Id: 525254
Other names: A. lactolyticus ATCC 51172, Anaerococcus lactolyticus ATCC 51172, Anaerococcus lactolyticus str. ATCC 51172, Anaerococcus lactolyticus strain ATCC 51172
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.