Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEI86490.1Hypothetical protein; COG: COG0619. (70 aa)    
Predicted Functional Partners:
sdcBB
Cobalt transport family protein; COG: COG0619.
     0.981
EEI85476.1
Hypothetical protein; COG: COG0619; Pfam: PF02361.
 
     0.969
EEI86380.1
ABC transporter, ATP-binding protein; COG: COG1122; Pfam: PF00005; InterPro: IPR003593.
 
 0.942
EEI86381.1
Hypothetical protein; COG: COG4720; Pfam: PF07155; InterPro: IPR009825.
 
 
 0.926
ecfA
ABC transporter, ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
  
 0.847
ecfA-2
ABC transporter, ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
  
 0.847
EEI85277.1
Hypothetical protein.
  
 0.793
EEI87039.1
Hypothetical protein.
   
 
 0.718
EEI86382.1
Hypothetical protein; COG: COG1912; Pfam: PF01887; InterPro: IPR002747.
 
     0.710
EEI87183.1
ABC transporter, ATP-binding protein; COG: COG1122; Pfam: PF00005; InterPro: IPR003439.
  
 0.600
Your Current Organism:
Anaerococcus lactolyticus
NCBI taxonomy Id: 525254
Other names: A. lactolyticus ATCC 51172, Anaerococcus lactolyticus ATCC 51172, Anaerococcus lactolyticus str. ATCC 51172, Anaerococcus lactolyticus strain ATCC 51172
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