STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EEI85455.1Oxidoreductase, NAD-binding domain protein; COG: COG0673; Pfam: PF01408; InterPro: IPR016040. (331 aa)    
Predicted Functional Partners:
EEI86241.1
AP endonuclease, family 2; Pfam: PF01261; InterPro: IPR013022.
 
 
 0.843
lysS
lysine--tRNA ligase; COG: COG1190; Pfam: PF01336,PF00152,PF01588; InterPro: IPR002313; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.815
EEI85214.1
Putative methionine--tRNA ligase, beta subunit; COG: COG0073; Pfam: PF01588; InterPro: IPR012340.
  
    0.815
EEI85801.1
NAD dependent epimerase/dehydratase family protein; Pfam: PF01370.
  
 
 0.731
ywdH
Aldehyde dehydrogenase (NAD) family protein; COG: COG1012; Pfam: PF00171; InterPro: IPR012394; Belongs to the aldehyde dehydrogenase family.
  
 
 0.725
EEI86808.1
GroES-like protein; Pfam: PF08240; InterPro: IPR013154.
  
 
 0.713
malH
Family 4 glycosyl hydrolase; COG: COG1486; Pfam: PF02056; InterPro: IPR001088.
  
  
  0.711
EEI85353.1
Aldose 1-epimerase; Pfam: PF01263; InterPro: IPR014718.
  
 
 0.711
galE
UDP-glucose 4-epimerase; COG: COG1087; Pfam: PF01370; InterPro: IPR005886; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
 
 0.706
ugd
Nucleotide sugar dehydrogenase; COG: COG1004; Pfam: PF03721,PF00984,PF03720; InterPro: IPR014028.
    
 0.694
Your Current Organism:
Anaerococcus lactolyticus
NCBI taxonomy Id: 525254
Other names: A. lactolyticus ATCC 51172, Anaerococcus lactolyticus ATCC 51172, Anaerococcus lactolyticus str. ATCC 51172, Anaerococcus lactolyticus strain ATCC 51172
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