STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ccsBCytochrome c-type biogenesis protein CcsB; COG: COG0755; Pfam: PF01578; InterPro: IPR002541. (273 aa)    
Predicted Functional Partners:
EEI85432.1
ResB-like protein; Pfam: PF05140; InterPro: IPR007816.
 
  
 0.993
EEI85431.1
Putative nitrite reductase; COG: COG3303; Pfam: PF02335; InterPro: IPR003321; Belongs to the cytochrome c-552 family.
 
  
 0.881
EEI85434.1
Hypothetical protein.
       0.762
EEI86360.1
Redoxin family protein; Pfam: PF08534; InterPro: IPR013740.
 
  
 0.759
EEI87345.1
ABC transporter, ATP-binding protein; COG: COG1131; Pfam: PF00005; InterPro: IPR003593.
    
 0.638
EEI86651.1
ABC transporter, ATP-binding protein; COG: COG1131; Pfam: PF00005; InterPro: IPR003593.
    
 0.638
cysK
Cysteine synthase A; COG: COG0031; Pfam: PF00291; InterPro: IPR005859.
     
 0.614
rplI
Ribosomal protein L9; Binds to the 23S rRNA.
       0.538
EEI85435.1
Hypothetical protein.
       0.528
EEI85436.1
DHH family protein; COG: COG3887; Pfam: PF01368; InterPro: IPR001667.
       0.528
Your Current Organism:
Anaerococcus lactolyticus
NCBI taxonomy Id: 525254
Other names: A. lactolyticus ATCC 51172, Anaerococcus lactolyticus ATCC 51172, Anaerococcus lactolyticus str. ATCC 51172, Anaerococcus lactolyticus strain ATCC 51172
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.