STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EEI85441.1DnaD domain protein; Pfam: PF04271; InterPro: IPR006343. (246 aa)    
Predicted Functional Partners:
EEI85442.1
Putative DNA replication protein DnaC.
 
  
 0.916
EEI85440.1
Acetyltransferase, GNAT family; Pfam: PF00583; InterPro: IPR016181.
 
     0.898
EEI85436.1
DHH family protein; COG: COG3887; Pfam: PF01368; InterPro: IPR001667.
 
     0.851
EEI85437.1
DHHA1 domain protein; COG: COG3887; Pfam: PF02272.
 
     0.840
dnaB
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
  
  
 0.833
rplI
Ribosomal protein L9; Binds to the 23S rRNA.
       0.822
nnrE
YjeF-like protein; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family.
       0.822
EEI85435.1
Hypothetical protein.
       0.788
EEI86718.1
Tetratricopeptide repeat protein; Pfam: PF07719,PF00515; InterPro: IPR011990.
  
     0.759
EEI86744.1
Hypothetical protein.
  
     0.747
Your Current Organism:
Anaerococcus lactolyticus
NCBI taxonomy Id: 525254
Other names: A. lactolyticus ATCC 51172, Anaerococcus lactolyticus ATCC 51172, Anaerococcus lactolyticus str. ATCC 51172, Anaerococcus lactolyticus strain ATCC 51172
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.