STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEI85445.1Acyltransferase; COG: COG1835; Pfam: PF01757; InterPro: IPR002656. (638 aa)    
Predicted Functional Partners:
EEI87105.1
Hypothetical protein.
 
     0.487
EEI86940.1
Hypothetical protein; COG: COG2898; Pfam: PF04329,PF04330,PF04331; InterPro: IPR007424.
 
   
 0.442
EEI87014.1
Hypothetical protein.
 
     0.434
EEI85761.1
SH3 domain protein; Pfam: PF08239,PF06737; InterPro: IPR013247.
  
     0.434
EEI87033.1
Mur ligase middle domain protein; COG: COG0769; Pfam: PF08245,PF08353; InterPro: IPR013221.
  
     0.431
EEI86235.1
Cell wall-binding repeat protein; COG: COG0791; Pfam: PF05382; InterPro: IPR008044.
  
   
 0.431
EEI85820.1
Transcriptional regulator, ArsR family; Pfam: PF01022; InterPro: IPR011991.
  
   
 0.416
Your Current Organism:
Anaerococcus lactolyticus
NCBI taxonomy Id: 525254
Other names: A. lactolyticus ATCC 51172, Anaerococcus lactolyticus ATCC 51172, Anaerococcus lactolyticus str. ATCC 51172, Anaerococcus lactolyticus strain ATCC 51172
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.