STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEI85447.1Phosphorylase family; Pfam: PF01048. (254 aa)    
Predicted Functional Partners:
cdd
Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.
  
 
 0.871
serS
serine--tRNA ligase; COG: COG0172; Pfam: PF02403,PF00587; InterPro: IPR002317.
 
     0.614
udk
Uridine kinase; COG: COG0572; Pfam: PF00485; InterPro: IPR000764.
    
 0.594
pyrD
Dihydroorotate dehydrogenase 1B; Catalyzes the conversion of dihydroorotate to orotate.
    
 0.588
kdgK
Kinase, PfkB family; COG: COG0524; Pfam: PF00294; InterPro: IPR011611.
   
 0.588
rbsK
Putative ribokinase; COG: COG0524; Pfam: PF00294; InterPro: IPR011611.
   
 0.588
EEI85430.1
Ser/Thr phosphatase family protein; Pfam: PF00149; InterPro: IPR004843.
  
  
  0.576
EEI86787.1
Hydrolase, alpha/beta domain protein; Pfam: PF00561.
 
  
  0.566
pyrE
Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
    
 0.561
upp
Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.
     
 0.557
Your Current Organism:
Anaerococcus lactolyticus
NCBI taxonomy Id: 525254
Other names: A. lactolyticus ATCC 51172, Anaerococcus lactolyticus ATCC 51172, Anaerococcus lactolyticus str. ATCC 51172, Anaerococcus lactolyticus strain ATCC 51172
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.