STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
nqrFlavin reductase; COG: COG0431; Pfam: PF03358; InterPro: IPR005025. (179 aa)    
Predicted Functional Partners:
EEI87236.1
Hypothetical protein.
  
 
 0.851
EEI85450.1
Oxidoreductase NAD-binding domain protein; COG: COG0543; Pfam: PF00970,PF00175; InterPro: IPR012165.
    
  0.742
EEI87040.1
Hypothetical protein.
    
 0.691
gltA-2
Glutamate synthase (NADPH), homotetrameric; COG: COG0493; Pfam: PF07992,PF00070; InterPro: IPR006004.
    
  0.682
EEI86949.1
Putative HAD hydrolase, TIGR02254 family; COG: COG1011; Pfam: PF00702.
  
 
 0.665
EEI85392.1
Rhodanese-like protein; Pfam: PF00581; InterPro: IPR001763.
    
 0.659
ribF
Riboflavin biosynthesis protein RibF; COG: COG0196; Pfam: PF06574,PF01687; InterPro: IPR002606; Belongs to the ribF family.
    
 0.657
EEI85800.1
DJ-1 family protein; COG: COG0693; Pfam: PF01965; InterPro: IPR006287.
    
 0.656
EEI85973.1
Hypothetical protein; Pfam: PF04199.
    
  0.655
EEI86712.1
Hypothetical protein.
  
 0.642
Your Current Organism:
Anaerococcus lactolyticus
NCBI taxonomy Id: 525254
Other names: A. lactolyticus ATCC 51172, Anaerococcus lactolyticus ATCC 51172, Anaerococcus lactolyticus str. ATCC 51172, Anaerococcus lactolyticus strain ATCC 51172
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.