STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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Textmining
[Homology]
Score
gltA-2Glutamate synthase (NADPH), homotetrameric; COG: COG0493; Pfam: PF07992,PF00070; InterPro: IPR006004. (464 aa)    
Predicted Functional Partners:
EEI85450.1
Oxidoreductase NAD-binding domain protein; COG: COG0543; Pfam: PF00970,PF00175; InterPro: IPR012165.
 
 0.999
pyrD
Dihydroorotate dehydrogenase 1B; Catalyzes the conversion of dihydroorotate to orotate.
 0.987
nifJ
Pyruvate synthase; COG: COG0674; Pfam: PF01855,PF01558,PF00037,PF02775; InterPro: IPR011895.
    
 0.962
nifJ-2
Pyruvate synthase; COG: COG0674; Pfam: PF01855,PF01558,PF00037; InterPro: IPR011895.
    
 0.962
nemA
Pyridine nucleotide-disulfide oxidoreductase; COG: COG1902; Pfam: PF00724,PF07992,PF00070; InterPro: IPR013785.
 
 
 0.949
rnfB
Electron transport complex, RnfABCDGE type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
   
 0.936
EEI85575.1
Putative iron-sulfur cluster-binding protein; COG: COG1139; Pfam: PF02589,PF00037,PF02754; InterPro: IPR004017.
    
 0.936
EEI87227.1
Oxidoreductase NAD-binding domain protein; COG: COG0543; Pfam: PF00970,PF00175; InterPro: IPR012165.
 
 
 0.930
gdh
Glu/Leu/Phe/Val dehydrogenase, dimerization domain protein; COG: COG0334; Pfam: PF02812,PF00208; InterPro: IPR014362; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 
 0.925
EEI86740.1
Electron transfer flavoprotein domain protein; COG: COG2086; Pfam: PF01012; InterPro: IPR014729.
  
 0.924
Your Current Organism:
Anaerococcus lactolyticus
NCBI taxonomy Id: 525254
Other names: A. lactolyticus ATCC 51172, Anaerococcus lactolyticus ATCC 51172, Anaerococcus lactolyticus str. ATCC 51172, Anaerococcus lactolyticus strain ATCC 51172
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