STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEI85199.1ABC transporter, ATP-binding protein; COG: COG1132; Pfam: PF00005; InterPro: IPR003593. (581 aa)    
Predicted Functional Partners:
EEI85196.1
Cobalt transport protein; Pfam: PF02361.
 
     0.930
EEI85195.1
Conserved hypothetical protein TIGR02185; InterPro: IPR011733.
 
     0.890
EEI85197.1
ABC transporter, ATP-binding protein; COG: COG1122; Pfam: PF00005; InterPro: IPR003593.
 
    
0.825
EEI85198.1
ABC transporter, ATP-binding protein; COG: COG1132; Pfam: PF00664,PF00005; InterPro: IPR003593.
 
    
0.819
EEI85194.1
Transcriptional regulator, TetR family; Pfam: PF00440; InterPro: IPR012287.
 
     0.812
EEI85200.1
MATE efflux family protein; COG: COG0534; Pfam: PF01554; InterPro: IPR002528.
       0.668
metN
ABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
     
0.532
EEI85488.1
ABC transporter, ATP-binding protein; COG: COG1136; Pfam: PF00005; InterPro: IPR003593.
     
0.514
EEI85976.1
Cobalt transport protein; Pfam: PF02361.
  
     0.508
EEI85968.1
ABC transporter, ATP-binding protein; COG: COG1122; Pfam: PF00005; InterPro: IPR003439.
 
     0.500
Your Current Organism:
Anaerococcus lactolyticus
NCBI taxonomy Id: 525254
Other names: A. lactolyticus ATCC 51172, Anaerococcus lactolyticus ATCC 51172, Anaerococcus lactolyticus str. ATCC 51172, Anaerococcus lactolyticus strain ATCC 51172
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.