STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tuaD_2Nucleotide sugar dehydrogenase; COG: COG1004; Pfam: PF03721,PF00984,PF03720; InterPro: IPR014028. (437 aa)    
Predicted Functional Partners:
EFK33073.1
NAD dependent epimerase/dehydratase family protein; COG: COG0451; Pfam: PF01370; InterPro: IPR016040.
  
 0.983
galE_2
NAD dependent epimerase/dehydratase family protein; COG: COG0451; Pfam: PF01370; InterPro: IPR016040.
 
 0.979
rfbB
dTDP-glucose 4,6-dehydratase; COG: COG1088; Pfam: PF01370; InterPro: IPR005888; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
 
 0.975
rfbA
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
 
 0.960
galE
UDP-glucose 4-epimerase; COG: COG1087; Pfam: PF01370; InterPro: IPR005886; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
 
 0.938
gtaB
Putative glucose-1-phosphate thymidylyltransferase; COG: COG1209; Pfam: PF00483; InterPro: IPR005835.
  
 
 0.802
EFK33594.1
Hypothetical protein; Pfam: PF00483.
  
 
 0.802
galE_3
NAD dependent epimerase/dehydratase family protein; COG: COG0451; Pfam: PF01370; InterPro: IPR016040.
 
 0.794
rfbC
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
  
 0.783
EFK37871.1
Hypothetical protein.
       0.782
Your Current Organism:
Chryseobacterium gleum
NCBI taxonomy Id: 525257
Other names: C. gleum ATCC 35910, Chryseobacterium gleum ATCC 35910, Chryseobacterium gleum CCUG 14555, Chryseobacterium gleum str. ATCC 35910, Chryseobacterium gleum strain ATCC 35910
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