STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
corAPutative magnesium and cobalt transport protein CorA; Pfam: PF01544; InterPro: IPR002523. (299 aa)    
Predicted Functional Partners:
fabHA-2
Beta-ketoacyl-acyl-carrier-protein synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.
       0.555
EFK33479.1
Phospholipase, patatin family; Pfam: PF01734.
       0.531
recB
UvrD/REP helicase; Pfam: PF00580; InterPro: IPR000212.
 
    0.475
EFK33476.1
Hypothetical protein.
       0.459
EFK33477.1
Hypothetical protein.
       0.459
EFK33478.1
Hypothetical protein.
       0.459
yigZ
Putative YigZ family protein; COG: COG1739; Pfam: PF01205; InterPro: IPR001498.
  
    0.425
Your Current Organism:
Chryseobacterium gleum
NCBI taxonomy Id: 525257
Other names: C. gleum ATCC 35910, Chryseobacterium gleum ATCC 35910, Chryseobacterium gleum CCUG 14555, Chryseobacterium gleum str. ATCC 35910, Chryseobacterium gleum strain ATCC 35910
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