Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
EFK34333.1Hypothetical protein. (146 aa)    
Predicted Functional Partners:
gyrA_3
DNA gyrase/topoisomerase IV, A subunit; COG: COG0188; Pfam: PF00521; InterPro: IPR002205.
       0.821
EFK37086.1
Bacteroidetes-specific putative membrane protein.
  
     0.675
EFK34335.1
Peptidase, S54 family; Pfam: PF01694; InterPro: IPR002610.
       0.671
EFK37210.1
TonB-dependent receptor; Pfam: PF07715,PF00593.
  
     0.667
EFK32899.1
VanZ-like protein; Pfam: PF04892; InterPro: IPR006976.
  
     0.657
EFK37137.1
Hypothetical protein.
  
     0.643
EFK37858.1
Hypothetical protein.
  
     0.631
EFK35029.1
Hypothetical protein.
  
     0.597
gyrB_1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; COG: COG0187; Pfam: PF02518,PF00204; InterPro: IPR001241.
       0.577
chbR_1
Transcriptional regulator, AraC family; Pfam: PF00165; InterPro: IPR000005.
       0.572
Your Current Organism:
Chryseobacterium gleum
NCBI taxonomy Id: 525257
Other names: C. gleum ATCC 35910, Chryseobacterium gleum ATCC 35910, Chryseobacterium gleum CCUG 14555, Chryseobacterium gleum str. ATCC 35910, Chryseobacterium gleum strain ATCC 35910
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