STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lolDABC transporter, ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family. (222 aa)    
Predicted Functional Partners:
lolE
Efflux ABC transporter, permease protein; Pfam: PF02687; InterPro: IPR003838.
 
 0.993
macB_4
Efflux ABC transporter, permease protein; COG: COG0577; Pfam: PF02687; InterPro: IPR003838.
 0.993
EFK37039.1
Efflux ABC transporter, permease protein; Pfam: PF02687; InterPro: IPR003838.
  
 0.992
macB_1
Efflux ABC transporter, permease protein; Pfam: PF02687; InterPro: IPR003838.
 0.959
macB_2
Efflux ABC transporter, permease protein; Pfam: PF02687; InterPro: IPR003838.
 0.958
lolA
Outer membrane lipoprotein carrier protein LolA; Pfam: PF03548.
   
 
 0.834
EFK34958.1
Hypothetical protein.
   
 
 0.834
rpsE
Ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.
  
   
 0.762
EFK35031.1
Hypothetical protein.
       0.749
gcp
Putative glycoprotease GCP; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
 
     0.715
Your Current Organism:
Chryseobacterium gleum
NCBI taxonomy Id: 525257
Other names: C. gleum ATCC 35910, Chryseobacterium gleum ATCC 35910, Chryseobacterium gleum CCUG 14555, Chryseobacterium gleum str. ATCC 35910, Chryseobacterium gleum strain ATCC 35910
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