Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEI18186.1Sortase family protein. (265 aa)    
Predicted Functional Partners:
EEI18187.1
Hypothetical protein.
 
   
 0.882
EEI18190.1
Hypothetical protein.
  
     0.705
EEI18185.1
Putative inner membrane protein translocase component YidC.
     
 0.684
EEI15861.1
Hypothetical protein.
  
     0.539
EEI16553.1
Hypothetical protein.
  
     0.446
EEI17853.1
Exonuclease.
  
     0.436
EEI18016.1
Hypothetical protein.
  
     0.435
EEI15968.1
PspC domain protein.
  
     0.408
EEI17981.1
Hypothetical protein.
  
     0.404
Your Current Organism:
Corynebacterium lipophiloflavum
NCBI taxonomy Id: 525263
Other names: C. lipophiloflavum DSM 44291, Corynebacterium lipophiloflavum DSM 44291, Corynebacterium lipophiloflavum str. DSM 44291, Corynebacterium lipophiloflavum strain DSM 44291
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