Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEI17189.1Hypothetical protein. (203 aa)    
Predicted Functional Partners:
EEI17200.1
Hypothetical protein.
     0.985
gulo
FAD-linked oxidoreductase.
 
 
  0.896
EEI17190.1
Protozoan/cyanobacterial globin family protein.
       0.619
EEI17191.1
Hypothetical protein.
       0.601
EEI16305.1
Hypothetical protein; 2.6.1.45.
 
  
  0.489
EEI17667.1
FAD binding domain protein.
  
     0.452
Your Current Organism:
Corynebacterium lipophiloflavum
NCBI taxonomy Id: 525263
Other names: C. lipophiloflavum DSM 44291, Corynebacterium lipophiloflavum DSM 44291, Corynebacterium lipophiloflavum str. DSM 44291, Corynebacterium lipophiloflavum strain DSM 44291
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