Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEI16227.1Hypothetical protein. (189 aa)    
Predicted Functional Partners:
EEI16228.1
HAD hydrolase, family IB.
  
    0.697
EEI16226.1
Hydrolase, alpha/beta domain protein.
       0.669
EEI17946.1
Hypothetical protein; May play a role in the intracellular transport of hydrophobic ligands.
  
     0.543
EEI18166.1
Hypothetical protein.
  
     0.528
EEI16229.1
CpaE-like protein.
 
     0.504
EEI17617.1
Hypothetical protein.
  
     0.490
EEI16741.1
Hypothetical protein.
  
     0.458
EEI16733.1
Hypothetical protein.
  
     0.445
EEI16613.1
Thiamin pyrophosphokinase, catalytic domain protein.
  
     0.435
EEI15838.1
Hypothetical protein.
  
     0.431
Your Current Organism:
Corynebacterium lipophiloflavum
NCBI taxonomy Id: 525263
Other names: C. lipophiloflavum DSM 44291, Corynebacterium lipophiloflavum DSM 44291, Corynebacterium lipophiloflavum str. DSM 44291, Corynebacterium lipophiloflavum strain DSM 44291
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