Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFH92591.1 | EFH93513.1 | HMPREF0391_11563 | HMPREF0391_11171 | Oxidoreductase, short chain dehydrogenase/reductase family protein; COG: COG1028; Pfam: PF00106; InterPro: IPR016040. | Transposase-like protein; COG: COG1943; Pfam: PF01797; InterPro: IPR002686. | 0.479 |
EFH92591.1 | nifJ | HMPREF0391_11563 | HMPREF0391_10712 | Oxidoreductase, short chain dehydrogenase/reductase family protein; COG: COG1028; Pfam: PF00106; InterPro: IPR016040. | Pyruvate synthase; COG: COG0674; Pfam: PF01855,PF01558,PF00037,PF02775; InterPro: IPR011895. | 0.952 |
EFH93512.1 | EFH93513.1 | HMPREF0391_11170 | HMPREF0391_11171 | Hypothetical protein. | Transposase-like protein; COG: COG1943; Pfam: PF01797; InterPro: IPR002686. | 0.458 |
EFH93513.1 | EFH92591.1 | HMPREF0391_11171 | HMPREF0391_11563 | Transposase-like protein; COG: COG1943; Pfam: PF01797; InterPro: IPR002686. | Oxidoreductase, short chain dehydrogenase/reductase family protein; COG: COG1028; Pfam: PF00106; InterPro: IPR016040. | 0.479 |
EFH93513.1 | EFH93512.1 | HMPREF0391_11171 | HMPREF0391_11170 | Transposase-like protein; COG: COG1943; Pfam: PF01797; InterPro: IPR002686. | Hypothetical protein. | 0.458 |
EFH93513.1 | EFH93514.1 | HMPREF0391_11171 | HMPREF0391_11172 | Transposase-like protein; COG: COG1943; Pfam: PF01797; InterPro: IPR002686. | Hypothetical protein. | 0.440 |
EFH93513.1 | nifJ | HMPREF0391_11171 | HMPREF0391_10712 | Transposase-like protein; COG: COG1943; Pfam: PF01797; InterPro: IPR002686. | Pyruvate synthase; COG: COG0674; Pfam: PF01855,PF01558,PF00037,PF02775; InterPro: IPR011895. | 0.906 |
EFH93514.1 | EFH93513.1 | HMPREF0391_11172 | HMPREF0391_11171 | Hypothetical protein. | Transposase-like protein; COG: COG1943; Pfam: PF01797; InterPro: IPR002686. | 0.440 |
nifJ | EFH92591.1 | HMPREF0391_10712 | HMPREF0391_11563 | Pyruvate synthase; COG: COG0674; Pfam: PF01855,PF01558,PF00037,PF02775; InterPro: IPR011895. | Oxidoreductase, short chain dehydrogenase/reductase family protein; COG: COG1028; Pfam: PF00106; InterPro: IPR016040. | 0.952 |
nifJ | EFH93513.1 | HMPREF0391_10712 | HMPREF0391_11171 | Pyruvate synthase; COG: COG0674; Pfam: PF01855,PF01558,PF00037,PF02775; InterPro: IPR011895. | Transposase-like protein; COG: COG1943; Pfam: PF01797; InterPro: IPR002686. | 0.906 |