STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFH93531.1Transposase; Pfam: PF01527. (202 aa)    
Predicted Functional Partners:
EFH93530.1
Integrase core domain protein; COG: COG2801; Pfam: PF00665; InterPro: IPR001584.
 
    0.768
EFH93532.1
Hypothetical protein.
       0.545
EFH93533.1
Putative glutamate--cysteine ligase; Catalyzes the synthesis of gamma-glutamylcysteine (gamma-GC). Belongs to the glutamate--cysteine ligase type 2 family. EgtA subfamily.
       0.545
EFH93534.1
YbaK/EbsC protein; COG: COG2606; Pfam: PF04073; InterPro: IPR007214; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily.
       0.545
EFH93875.1
LPXTG-motif cell wall anchor domain protein; Pfam: PF05738,PF00746; InterPro: IPR008454.
  
     0.427
EFH93873.1
LPXTG-motif cell wall anchor domain protein; Pfam: PF05738,PF00746.
  
     0.408
Your Current Organism:
Finegoldia magna ATCC 53516
NCBI taxonomy Id: 525282
Other names: F. magna ATCC 53516, Finegoldia magna str. ATCC 53516, Finegoldia magna strain ATCC 53516
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.