STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFH92357.1EDD domain protein, DegV family; COG: COG1307; Pfam: PF02645; InterPro: IPR003797. (284 aa)    
Predicted Functional Partners:
EFH92443.1
DAK2 domain fusion protein YloV; COG: COG1461; Pfam: PF02734; InterPro: IPR004007.
   0.969
EFH94105.1
Hypothetical protein.
 
   0.717
EFH92355.1
Integrase core domain protein; COG: COG2801; Pfam: PF00665; InterPro: IPR001584; overlaps another CDS with the same product name.
       0.578
EFH92356.1
Transposase; COG: COG2963; Pfam: PF01527.
       0.578
EFH92358.1
PAS domain S-box protein; COG: COG0642; Pfam: PF08448,PF00512,PF02518; InterPro: IPR003594.
       0.527
EFH92359.1
Response regulator receiver domain protein; COG: COG0745; Pfam: PF00072,PF00486; InterPro: IPR001789.
       0.527
phoU
Phosphate transport system regulatory protein PhoU; Plays a role in the regulation of phosphate uptake.
       0.527
pstB
Phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
       0.510
pstA
Phosphate ABC transporter, permease protein PstA; COG: COG0581; Pfam: PF00528; InterPro: IPR005672.
       0.510
pstC-2
Phosphate ABC transporter, permease protein PstC; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
       0.510
Your Current Organism:
Finegoldia magna ATCC 53516
NCBI taxonomy Id: 525282
Other names: F. magna ATCC 53516, Finegoldia magna str. ATCC 53516, Finegoldia magna strain ATCC 53516
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