STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFH92713.1Cobalt transport protein; Pfam: PF02361. (233 aa)    
Predicted Functional Partners:
EFH92712.1
ABC transporter, ATP-binding protein; COG: COG1122; Pfam: PF00005; InterPro: IPR003439.
 
  0.984
EFH92714.1
Conserved hypothetical protein TIGR02185; InterPro: IPR011733.
 
     0.933
EFH93717.1
ABC transporter, ATP-binding protein; COG: COG1122; Pfam: PF00005; InterPro: IPR003439.
  
  0.924
EFH93752.1
ABC transporter, ATP-binding protein; COG: COG1122; Pfam: PF00005; InterPro: IPR003593.
  
  0.923
EFH93730.1
ABC transporter, ATP-binding protein; COG: COG1122; Pfam: PF00005; InterPro: IPR003439.
  
  0.916
EFH92715.1
Transcriptional regulator, TetR family; Pfam: PF00440; InterPro: IPR012287.
 
     0.894
EFH92710.1
ABC transporter, ATP-binding protein; COG: COG1132; Pfam: PF00664,PF00005; InterPro: IPR003593.
 
  
  0.876
EFH92711.1
ABC transporter, ATP-binding protein; COG: COG1132; Pfam: PF00664,PF00005; InterPro: IPR003593.
 
  
  0.872
EFH93753.1
Cobalt transport protein; Pfam: PF02361.
  
  
 
0.864
ecfA
Cobalt ABC transporter, ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
   
 0.854
Your Current Organism:
Finegoldia magna ATCC 53516
NCBI taxonomy Id: 525282
Other names: F. magna ATCC 53516, Finegoldia magna str. ATCC 53516, Finegoldia magna strain ATCC 53516
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