STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEW54800.1Hypothetical protein. (92 aa)    
Predicted Functional Partners:
EEW54799.1
Hypothetical protein.
 
     0.934
EEW54798.1
MobA/MobL family protein; COG: COG0507; Pfam: PF03389; InterPro: IPR005053.
 
   
 0.854
EEW52774.1
Hypothetical protein.
 
     0.790
EEW52775.1
MobA/MobL family protein; COG: COG0507; Pfam: PF03389; InterPro: IPR005053.
 
   
 0.760
repA
Replication initiator protein A domain protein; Pfam: PF06970; InterPro: IPR010724.
  
     0.721
repA-2
Replication initiator protein A domain protein; Pfam: PF06970; InterPro: IPR010724.
  
     0.713
EEW52606.1
Hypothetical protein.
 
   
 0.691
EEW54801.1
Hypothetical protein; COG: COG4185.
  
     0.548
Your Current Organism:
Lactobacillus antri
NCBI taxonomy Id: 525309
Other names: L. antri DSM 16041, Lactobacillus antri DSM 16041, Lactobacillus antri str. DSM 16041, Lactobacillus antri strain DSM 16041
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.