STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEW54821.1Hypothetical protein. (182 aa)    
Predicted Functional Partners:
EEW54820.1
Heavy metal-associated domain protein; Pfam: PF00403.
 
  
 0.993
rcfA
Cyclic nucleotide-binding domain protein; COG: COG0664; Pfam: PF00027,PF00325; InterPro: IPR014710.
 
     0.954
EEW54819.1
Putative cadmium-exporting ATPase; COG: COG2217; Pfam: PF00122,PF00702; InterPro: IPR001757.
 
  
 0.885
EEW54823.1
Transposase; tnpSth; Pfam: PF01527.
       0.651
EEW53512.1
Putative thioredoxin-disulfide reductase; COG: COG0492; Pfam: PF07992,PF00070; InterPro: IPR013027.
  
  
 0.637
ahpC
Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.
  
  
 0.584
EEW52983.1
Flavin reductase; Pfam: PF03358.
  
  
 0.557
raiA
Ribosomal subunit interface protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.
  
    0.546
EEW54115.1
Transcriptional regulator, MerR family; Pfam: PF00376.
  
  
 0.536
EEW52886.1
Tetratricopeptide repeat protein; Pfam: PF01381,PF00515; InterPro: IPR001387.
  
     0.445
Your Current Organism:
Lactobacillus antri
NCBI taxonomy Id: 525309
Other names: L. antri DSM 16041, Lactobacillus antri DSM 16041, Lactobacillus antri str. DSM 16041, Lactobacillus antri strain DSM 16041
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.