Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EEW54718.1 | EEW54719.1 | HMPREF0494_0095 | HMPREF0494_0096 | Hypothetical protein. | PAP2 family protein; Pfam: PF01569. | 0.774 |
EEW54718.1 | EEW54720.1 | HMPREF0494_0095 | HMPREF0494_0097 | Hypothetical protein. | Helicase C-terminal domain protein; COG: COG1061; Pfam: PF04851,PF00271; InterPro: IPR006935. | 0.748 |
EEW54718.1 | EEW54722.1 | HMPREF0494_0095 | HMPREF0494_0099 | Hypothetical protein. | Transcriptional regulator, GntR family; COG: COG1725; Pfam: PF00392; InterPro: IPR011991. | 0.511 |
EEW54718.1 | EEW54723.1 | HMPREF0494_0095 | HMPREF0494_0100 | Hypothetical protein. | ABC transporter, ATP-binding protein; COG: COG1131; Pfam: PF00005; InterPro: IPR003439. | 0.511 |
EEW54718.1 | EEW54724.1 | HMPREF0494_0095 | HMPREF0494_0101 | Hypothetical protein. | Hypothetical protein. | 0.511 |
EEW54719.1 | EEW54718.1 | HMPREF0494_0096 | HMPREF0494_0095 | PAP2 family protein; Pfam: PF01569. | Hypothetical protein. | 0.774 |
EEW54719.1 | EEW54720.1 | HMPREF0494_0096 | HMPREF0494_0097 | PAP2 family protein; Pfam: PF01569. | Helicase C-terminal domain protein; COG: COG1061; Pfam: PF04851,PF00271; InterPro: IPR006935. | 0.844 |
EEW54719.1 | EEW54722.1 | HMPREF0494_0096 | HMPREF0494_0099 | PAP2 family protein; Pfam: PF01569. | Transcriptional regulator, GntR family; COG: COG1725; Pfam: PF00392; InterPro: IPR011991. | 0.511 |
EEW54719.1 | EEW54723.1 | HMPREF0494_0096 | HMPREF0494_0100 | PAP2 family protein; Pfam: PF01569. | ABC transporter, ATP-binding protein; COG: COG1131; Pfam: PF00005; InterPro: IPR003439. | 0.569 |
EEW54719.1 | EEW54724.1 | HMPREF0494_0096 | HMPREF0494_0101 | PAP2 family protein; Pfam: PF01569. | Hypothetical protein. | 0.511 |
EEW54720.1 | EEW54718.1 | HMPREF0494_0097 | HMPREF0494_0095 | Helicase C-terminal domain protein; COG: COG1061; Pfam: PF04851,PF00271; InterPro: IPR006935. | Hypothetical protein. | 0.748 |
EEW54720.1 | EEW54719.1 | HMPREF0494_0097 | HMPREF0494_0096 | Helicase C-terminal domain protein; COG: COG1061; Pfam: PF04851,PF00271; InterPro: IPR006935. | PAP2 family protein; Pfam: PF01569. | 0.844 |
EEW54720.1 | EEW54722.1 | HMPREF0494_0097 | HMPREF0494_0099 | Helicase C-terminal domain protein; COG: COG1061; Pfam: PF04851,PF00271; InterPro: IPR006935. | Transcriptional regulator, GntR family; COG: COG1725; Pfam: PF00392; InterPro: IPR011991. | 0.538 |
EEW54720.1 | EEW54723.1 | HMPREF0494_0097 | HMPREF0494_0100 | Helicase C-terminal domain protein; COG: COG1061; Pfam: PF04851,PF00271; InterPro: IPR006935. | ABC transporter, ATP-binding protein; COG: COG1131; Pfam: PF00005; InterPro: IPR003439. | 0.538 |
EEW54720.1 | EEW54724.1 | HMPREF0494_0097 | HMPREF0494_0101 | Helicase C-terminal domain protein; COG: COG1061; Pfam: PF04851,PF00271; InterPro: IPR006935. | Hypothetical protein. | 0.538 |
EEW54722.1 | EEW54718.1 | HMPREF0494_0099 | HMPREF0494_0095 | Transcriptional regulator, GntR family; COG: COG1725; Pfam: PF00392; InterPro: IPR011991. | Hypothetical protein. | 0.511 |
EEW54722.1 | EEW54719.1 | HMPREF0494_0099 | HMPREF0494_0096 | Transcriptional regulator, GntR family; COG: COG1725; Pfam: PF00392; InterPro: IPR011991. | PAP2 family protein; Pfam: PF01569. | 0.511 |
EEW54722.1 | EEW54720.1 | HMPREF0494_0099 | HMPREF0494_0097 | Transcriptional regulator, GntR family; COG: COG1725; Pfam: PF00392; InterPro: IPR011991. | Helicase C-terminal domain protein; COG: COG1061; Pfam: PF04851,PF00271; InterPro: IPR006935. | 0.538 |
EEW54722.1 | EEW54723.1 | HMPREF0494_0099 | HMPREF0494_0100 | Transcriptional regulator, GntR family; COG: COG1725; Pfam: PF00392; InterPro: IPR011991. | ABC transporter, ATP-binding protein; COG: COG1131; Pfam: PF00005; InterPro: IPR003439. | 0.978 |
EEW54722.1 | EEW54724.1 | HMPREF0494_0099 | HMPREF0494_0101 | Transcriptional regulator, GntR family; COG: COG1725; Pfam: PF00392; InterPro: IPR011991. | Hypothetical protein. | 0.781 |
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