STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
metN3ABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. (354 aa)    
Predicted Functional Partners:
metI2
ABC transporter, permease protein; COG: COG2011; Pfam: PF00528; InterPro: IPR000515.
 0.998
metQ2
NLPA lipoprotein; COG: COG1464; Pfam: PF03180; InterPro: IPR004872; Belongs to the nlpA lipoprotein family.
 0.998
metI
ABC transporter, permease protein; COG: COG2011; Pfam: PF00528; InterPro: IPR000515.
 0.992
metQ
NLPA lipoprotein; COG: COG1464; Pfam: PF03180; InterPro: IPR004872.
 0.992
abcA2
ABC transporter, ATP-binding protein; COG: COG1132; Pfam: PF00005; InterPro: IPR003439.
 
     
0.897
glnP5
ABC transporter, permease protein; COG: COG0765; Pfam: PF00528; InterPro: IPR000515.
 
      0.845
EEW54737.1
Peptidase, ArgE/DapE family; COG: COG0624; Pfam: PF01546,PF07687; InterPro: IPR010182.
 
     0.763
metF
Methylenetetrahydrofolate reductase (NAD(P)H); COG: COG0685; Pfam: PF02219; InterPro: IPR003171; Belongs to the methylenetetrahydrofolate reductase family.
   
 
 0.710
metA
Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-serine, forming acetyl-L-serine; Belongs to the MetA family.
  
    0.651
EEW52828.1
ABC transporter, ATP-binding protein; COG: COG1132; Pfam: PF00664,PF00005; InterPro: IPR001140.
 
     
0.645
Your Current Organism:
Lactobacillus antri
NCBI taxonomy Id: 525309
Other names: L. antri DSM 16041, Lactobacillus antri DSM 16041, Lactobacillus antri str. DSM 16041, Lactobacillus antri strain DSM 16041
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.