STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEW54660.1Putative sialic acid transporter; COG: COG0477; Pfam: PF07690; InterPro: IPR011701. (520 aa)    
Predicted Functional Partners:
EEW54659.1
YhcH/YjgK/YiaL family protein; Pfam: PF04074; InterPro: IPR004375.
 
     0.821
EEW54661.1
Acetyl xylan esterase (AXE1); COG: COG3458; Pfam: PF05448; InterPro: IPR008391.
 
     0.772
nanA
Putative N-acetylneuraminate lyase; COG: COG0329; Pfam: PF00701; InterPro: IPR002220; Belongs to the DapA family.
       0.711
EEW54153.1
Gram-positive signal peptide protein, YSIRK family; Pfam: PF04650,PF06458,PF00746; InterPro: IPR009459.
  
     0.547
EEW53582.1
KxYKxGKxW signal domain protein; Pfam: PF05382; InterPro: IPR008044.
  
     0.547
EEW52655.1
KxYKxGKxW signal domain protein.
  
     0.547
EEW53213.1
LPXTG-motif cell wall anchor domain protein; Pfam: PF04650,PF08363,PF06458,PF00746; InterPro: IPR009459.
  
     0.526
EEW53099.1
LPXTG-motif cell wall anchor domain protein; Pfam: PF06458,PF00746; InterPro: IPR009459.
  
     0.520
EEW54698.1
YeeE/YedE family protein.
  
     0.495
nagC
ROK family protein; COG: COG1940; Pfam: PF00480; InterPro: IPR000600.
       0.455
Your Current Organism:
Lactobacillus antri
NCBI taxonomy Id: 525309
Other names: L. antri DSM 16041, Lactobacillus antri DSM 16041, Lactobacillus antri str. DSM 16041, Lactobacillus antri strain DSM 16041
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.