STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEW54687.1ABC transporter, solute-binding protein; COG: COG4134. (420 aa)    
Predicted Functional Partners:
EEW54689.1
ABC transporter, permease protein; Pfam: PF00528.
 
  
  0.984
EEW54688.1
ABC transporter, permease protein; Pfam: PF00528; InterPro: IPR000515.
 
  
  0.969
EEW54692.1
Phosphotransferase enzyme family; Pfam: PF01636; InterPro: IPR002575.
 
     0.950
EEW54695.1
SNARE-like domain protein; COG: COG0398; Pfam: PF09335; InterPro: IPR015414.
 
  
 0.946
EEW54686.1
Cysteine-rich domain protein; Pfam: PF02754.
 
     0.934
EEW54685.1
4Fe-4S binding domain protein; Pfam: PF00037.
 
     0.933
iunH2
Inosine-uridine preferring nucleoside hydrolase; COG: COG1957; Pfam: PF01156; InterPro: IPR001910.
 
     0.908
cysA
ABC transporter, ATP-binding protein; COG: COG3842; Pfam: PF00005; InterPro: IPR003593.
 
  
  0.900
EEW54693.1
Hypothetical protein.
 
     0.895
EEW54691.1
Glycosyltransferase, group 2 family protein; Pfam: PF00535; InterPro: IPR001173.
 
     0.881
Your Current Organism:
Lactobacillus antri
NCBI taxonomy Id: 525309
Other names: L. antri DSM 16041, Lactobacillus antri DSM 16041, Lactobacillus antri str. DSM 16041, Lactobacillus antri strain DSM 16041
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.