STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cysAABC transporter, ATP-binding protein; COG: COG3842; Pfam: PF00005; InterPro: IPR003593. (335 aa)    
Predicted Functional Partners:
EEW54688.1
ABC transporter, permease protein; Pfam: PF00528; InterPro: IPR000515.
 
 0.987
EEW54689.1
ABC transporter, permease protein; Pfam: PF00528.
 
 
 0.980
EEW54687.1
ABC transporter, solute-binding protein; COG: COG4134.
 
  
  0.900
potH
ABC transporter, permease protein; COG: COG1176; Pfam: PF00528.
 0.885
potD
ABC transporter, solute-binding protein; COG: COG0687; Pfam: PF01547.
 
 0.869
potC
ABC transporter, permease protein; COG: COG1177; Pfam: PF00528.
 
 0.854
EEW54692.1
Phosphotransferase enzyme family; Pfam: PF01636; InterPro: IPR002575.
 
     0.843
EEW54691.1
Glycosyltransferase, group 2 family protein; Pfam: PF00535; InterPro: IPR001173.
 
    0.833
EEW54693.1
Hypothetical protein.
 
     0.816
iunH2
Inosine-uridine preferring nucleoside hydrolase; COG: COG1957; Pfam: PF01156; InterPro: IPR001910.
 
     0.816
Your Current Organism:
Lactobacillus antri
NCBI taxonomy Id: 525309
Other names: L. antri DSM 16041, Lactobacillus antri DSM 16041, Lactobacillus antri str. DSM 16041, Lactobacillus antri strain DSM 16041
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.