Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EEW53776.1 | EEW54550.1 | HMPREF0494_1074 | HMPREF0494_0292 | Hypothetical protein. | ErfK/YbiS/YcfS/YnhG; Pfam: PF03734. | 0.516 |
EEW53776.1 | pepN | HMPREF0494_1074 | HMPREF0494_0456 | Hypothetical protein. | Peptidase family M1; COG: COG0308; Pfam: PF01433; InterPro: IPR001930. | 0.634 |
EEW54550.1 | EEW53776.1 | HMPREF0494_0292 | HMPREF0494_1074 | ErfK/YbiS/YcfS/YnhG; Pfam: PF03734. | Hypothetical protein. | 0.516 |
EEW54550.1 | EEW54551.1 | HMPREF0494_0292 | HMPREF0494_0293 | ErfK/YbiS/YcfS/YnhG; Pfam: PF03734. | Hypothetical protein. | 0.505 |
EEW54550.1 | pepN | HMPREF0494_0292 | HMPREF0494_0456 | ErfK/YbiS/YcfS/YnhG; Pfam: PF03734. | Peptidase family M1; COG: COG0308; Pfam: PF01433; InterPro: IPR001930. | 0.428 |
EEW54551.1 | EEW54550.1 | HMPREF0494_0293 | HMPREF0494_0292 | Hypothetical protein. | ErfK/YbiS/YcfS/YnhG; Pfam: PF03734. | 0.505 |
pepN | EEW53776.1 | HMPREF0494_0456 | HMPREF0494_1074 | Peptidase family M1; COG: COG0308; Pfam: PF01433; InterPro: IPR001930. | Hypothetical protein. | 0.634 |
pepN | EEW54550.1 | HMPREF0494_0456 | HMPREF0494_0292 | Peptidase family M1; COG: COG0308; Pfam: PF01433; InterPro: IPR001930. | ErfK/YbiS/YcfS/YnhG; Pfam: PF03734. | 0.428 |