STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mntHMetal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family; COG: COG1914; Pfam: PF01566; InterPro: IPR001046. (538 aa)    
Predicted Functional Partners:
sirR
Iron dependent repressor DNA binding domain protein; COG: COG1321; Pfam: PF01325,PF02742,PF04023; InterPro: IPR001367.
 
  
 0.519
EEW54581.1
ABC 3 transport family protein; Pfam: PF00950; InterPro: IPR001626.
  
  
 0.474
EEW54324.1
Hypothetical protein.
       0.425
Your Current Organism:
Lactobacillus antri
NCBI taxonomy Id: 525309
Other names: L. antri DSM 16041, Lactobacillus antri DSM 16041, Lactobacillus antri str. DSM 16041, Lactobacillus antri strain DSM 16041
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.