STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEW54369.1Hypothetical protein. (108 aa)    
Predicted Functional Partners:
EEW54343.1
Hypothetical protein.
  
     0.755
EEW53370.1
Hypothetical protein.
  
     0.739
EEW54368.1
Hypothetical protein.
       0.732
EEW54181.1
DNA-binding helix-turn-helix protein; Pfam: PF01381; InterPro: IPR001387.
  
     0.668
EEW54180.1
Hypothetical protein.
  
     0.655
EEW54458.1
Hypothetical protein.
  
     0.653
EEW54244.1
Hypothetical protein.
  
     0.606
EEW54514.1
Hypothetical protein; Pfam: PF03591.
  
     0.571
EEW53455.1
Hypothetical protein.
  
     0.558
EEW54513.1
Branched-chain amino acid transport protein (AzlD); Pfam: PF05437; InterPro: IPR008407.
  
     0.542
Your Current Organism:
Lactobacillus antri
NCBI taxonomy Id: 525309
Other names: L. antri DSM 16041, Lactobacillus antri DSM 16041, Lactobacillus antri str. DSM 16041, Lactobacillus antri strain DSM 16041
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.