STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEW54210.1Gram-positive signal peptide protein, YSIRK family; Pfam: PF04650,PF06458,PF00746; InterPro: IPR005877. (594 aa)    
Predicted Functional Partners:
EEW53099.1
LPXTG-motif cell wall anchor domain protein; Pfam: PF06458,PF00746; InterPro: IPR009459.
 
  
  0.794
EEW54529.1
Gram-positive signal peptide protein, YSIRK family; Pfam: PF04650,PF08428,PF00746; InterPro: IPR012706.
 
     0.789
EEW53594.1
KxYKxGKxW signal domain protein; Pfam: PF00746.
 
   
 0.784
EEW53213.1
LPXTG-motif cell wall anchor domain protein; Pfam: PF04650,PF08363,PF06458,PF00746; InterPro: IPR009459.
 
     0.762
EEW52707.1
Hypothetical protein.
  
     0.751
EEW53540.1
Hypothetical protein; COG: COG2972; Pfam: PF02518.
  
     0.739
EEW53076.1
DnaD domain protein.
  
     0.731
EEW53319.1
LPXTG-motif cell wall anchor domain protein; Pfam: PF06458,PF00746; InterPro: IPR009459.
 
     0.691
EEW52739.1
Gram-positive signal peptide protein, YSIRK family; Pfam: PF04650,PF03382; InterPro: IPR005046.
 
     0.684
EEW52676.1
Acyltransferase; Pfam: PF01757.
  
     0.658
Your Current Organism:
Lactobacillus antri
NCBI taxonomy Id: 525309
Other names: L. antri DSM 16041, Lactobacillus antri DSM 16041, Lactobacillus antri str. DSM 16041, Lactobacillus antri strain DSM 16041
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.