STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pspCPspC domain protein; Pfam: PF04024; InterPro: IPR007168. (78 aa)    
Predicted Functional Partners:
EEW53866.1
Hypothetical protein; Pfam: PF04020; InterPro: IPR007165.
  
    0.713
EEW53865.1
PspC domain protein; Pfam: PF04024; InterPro: IPR007168.
  
     0.710
galM
Aldose 1-epimerase; Catalyzes the interconversion of alpha and beta anomers of maltose.
       0.709
EEW53566.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; COG: COG4585; Pfam: PF07730,PF02518; InterPro: IPR003594.
  
  
 0.633
EEW54464.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; COG: COG0642; Pfam: PF00512,PF02518; InterPro: IPR003594.
   
   0.505
htrA
Trypsin; COG: COG0265; Pfam: PF00089; InterPro: IPR001254.
  
  
 0.473
hpk
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; COG: COG0642; Pfam: PF00672,PF00512,PF02518; InterPro: IPR003594.
   
   0.453
hpk2
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; COG: COG0642; Pfam: PF00672,PF00512,PF02518; InterPro: IPR003594.
   
   0.453
EEW54361.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; COG: COG0642; Pfam: PF02518; InterPro: IPR003594.
  
   0.446
EEW54166.1
Transcriptional regulator, TetR family; Pfam: PF00440.
       0.443
Your Current Organism:
Lactobacillus antri
NCBI taxonomy Id: 525309
Other names: L. antri DSM 16041, Lactobacillus antri DSM 16041, Lactobacillus antri str. DSM 16041, Lactobacillus antri strain DSM 16041
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.