STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glnP4ABC transporter, permease protein; COG: COG0765; Pfam: PF00497,PF00528; InterPro: IPR001638. (502 aa)    
Predicted Functional Partners:
glnQ2
ABC transporter, ATP-binding protein; COG: COG1126; Pfam: PF00005; InterPro: IPR003593.
 0.992
glnQ
ABC transporter, ATP-binding protein; COG: COG1126; Pfam: PF00005; InterPro: IPR003593.
 0.991
glnQ3
ABC transporter, ATP-binding protein; COG: COG1126; Pfam: PF00005; InterPro: IPR003593.
 0.989
glnP2
ABC transporter, permease protein; COG: COG0834; Pfam: PF00497,PF00528; InterPro: IPR001638.
 
0.943
glnP3
ABC transporter, permease protein; COG: COG0834; Pfam: PF00497,PF00528; InterPro: IPR001638.
 
0.926
glnP
ABC transporter, permease protein; COG: COG0765; Pfam: PF00497,PF00528; InterPro: IPR001638.
 
0.925
macB
ABC transporter, ATP-binding protein; COG: COG1136; Pfam: PF00005; InterPro: IPR003593.
 
 
 0.667
macB2
ABC transporter, ATP-binding protein; COG: COG1136; Pfam: PF00005; InterPro: IPR003593.
 
 
 0.655
glnP5
ABC transporter, permease protein; COG: COG0765; Pfam: PF00528; InterPro: IPR000515.
 
0.655
yhcA
ABC transporter, ATP-binding protein; COG: COG1136; Pfam: PF00005,PF02687; InterPro: IPR003593.
 
 0.651
Your Current Organism:
Lactobacillus antri
NCBI taxonomy Id: 525309
Other names: L. antri DSM 16041, Lactobacillus antri DSM 16041, Lactobacillus antri str. DSM 16041, Lactobacillus antri strain DSM 16041
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.