STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEW53922.1Hypothetical protein. (199 aa)    
Predicted Functional Partners:
EEW53923.1
Hypothetical protein.
       0.732
EEW53921.1
Hypothetical protein.
       0.576
EEW53924.1
N-6 DNA Methylase; COG: COG0286; Pfam: PF02384; InterPro: IPR003356.
       0.568
EEW53925.1
Hypothetical protein; Pfam: PF01420; InterPro: IPR000055.
       0.568
hsdR
Type III restriction enzyme, res subunit; COG: COG0610; Pfam: PF04313,PF04851; InterPro: IPR006935.
       0.560
EEW53927.1
Hypothetical protein.
       0.560
EEW53920.1
Hypothetical protein.
       0.523
Your Current Organism:
Lactobacillus antri
NCBI taxonomy Id: 525309
Other names: L. antri DSM 16041, Lactobacillus antri DSM 16041, Lactobacillus antri str. DSM 16041, Lactobacillus antri strain DSM 16041
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.