STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
resType III restriction enzyme, res subunit; COG: COG3587; Pfam: PF04851; InterPro: IPR006935. (991 aa)    
Predicted Functional Partners:
mod
DNA (cytosine-5-)-methyltransferase; COG: COG2189; Pfam: PF01555; InterPro: IPR002941.
 
  
 0.978
EEW53936.1
Hypothetical protein.
     
 0.812
EEW53187.1
LPXTG-motif cell wall anchor domain protein; Pfam: PF04650,PF06458,PF00746; InterPro: IPR009459.
  
     0.547
EEW53933.1
Hypothetical protein.
       0.541
EEW53527.1
LPXTG-motif cell wall anchor domain protein; Pfam: PF06458,PF00746; InterPro: IPR009459.
  
     0.537
EEW53905.1
DNA (cytosine-5-)-methyltransferase; COG: COG0863; Pfam: PF02195,PF01555; InterPro: IPR002941; Belongs to the N(4)/N(6)-methyltransferase family.
     
 0.463
EEW52746.1
Transporter, major facilitator family protein; Pfam: PF07690; InterPro: IPR011701.
  
     0.462
EEW53937.1
Hypothetical protein.
       0.460
EEW53538.1
Gram-positive signal peptide protein, YSIRK family; Pfam: PF04650,PF06458,PF00746; InterPro: IPR009459.
  
     0.449
EEW53613.1
LPXTG-motif cell wall anchor domain protein; Pfam: PF06458,PF00746.
  
     0.444
Your Current Organism:
Lactobacillus antri
NCBI taxonomy Id: 525309
Other names: L. antri DSM 16041, Lactobacillus antri DSM 16041, Lactobacillus antri str. DSM 16041, Lactobacillus antri strain DSM 16041
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.