STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEW53602.1LPXTG-motif cell wall anchor domain protein; Pfam: PF00746. (724 aa)    
Predicted Functional Partners:
pepO
Peptidase family M13; COG: COG3590; Pfam: PF05649,PF01431; InterPro: IPR000718.
  
    0.655
EEW53045.1
Hypothetical protein; Pfam: PF06997; InterPro: IPR009735.
  
   0.654
ftsK
FtsK/SpoIIIE family protein; COG: COG1674; Pfam: PF01580; InterPro: IPR002543; Belongs to the FtsK/SpoIIIE/SftA family.
    
 
 0.623
EEW53099.1
LPXTG-motif cell wall anchor domain protein; Pfam: PF06458,PF00746; InterPro: IPR009459.
  
 0.612
EEW53898.1
Putative phage DNA packaging protein.
  
 0.578
EEW53697.1
Sigma-70 region 2; Pfam: PF04542,PF08281; InterPro: IPR014284; Belongs to the sigma-70 factor family. ECF subfamily.
   
  0.522
EEW53362.1
Gram-positive signal peptide protein, YSIRK family; Pfam: PF04650,PF00746; InterPro: IPR005877.
    
 0.475
EEW52739.1
Gram-positive signal peptide protein, YSIRK family; Pfam: PF04650,PF03382; InterPro: IPR005046.
    
 0.475
EEW54375.1
Hypothetical protein.
   
  0.471
EEW53140.1
GDSL-like protein; COG: COG2755; Pfam: PF00657; InterPro: IPR013831.
   
  0.471
Your Current Organism:
Lactobacillus antri
NCBI taxonomy Id: 525309
Other names: L. antri DSM 16041, Lactobacillus antri DSM 16041, Lactobacillus antri str. DSM 16041, Lactobacillus antri strain DSM 16041
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.