STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEW53543.1Gram-positive signal peptide protein, YSIRK family; Pfam: PF04650,PF07554,PF07564. (1380 aa)    
Predicted Functional Partners:
EEW52739.1
Gram-positive signal peptide protein, YSIRK family; Pfam: PF04650,PF03382; InterPro: IPR005046.
 
    0.530
yagE
Amino acid permease; COG: COG0531; Pfam: PF00324; InterPro: IPR002293.
  
     0.523
chpA
Toxin-antitoxin system, toxin component, MazF family; InterPro: IPR011067.
  
     0.513
yagE2
Amino acid permease; COG: COG0531; Pfam: PF00324; InterPro: IPR002293.
  
     0.490
EEW53255.1
Beta-lactamase; Pfam: PF00144; InterPro: IPR001466.
 
     0.482
EEW54736.1
PTS system Galactitol-specific IIC component; COG: COG3775; Pfam: PF03611; InterPro: IPR004703.
  
     0.475
cylB
ABC-2 type transporter; Pfam: PF01061.
 
 
  0.453
EEW52745.1
Transporter, major facilitator family protein; Pfam: PF07690; InterPro: IPR011701.
  
     0.411
EEW54066.1
Hypothetical protein; COG: COG2855; Pfam: PF03601; InterPro: IPR004630.
  
     0.409
yhjE
MFS transporter, metabolite:H+ symporter (MHS) family protein; COG: COG0477; Pfam: PF00083; InterPro: IPR005828.
       0.407
Your Current Organism:
Lactobacillus antri
NCBI taxonomy Id: 525309
Other names: L. antri DSM 16041, Lactobacillus antri DSM 16041, Lactobacillus antri str. DSM 16041, Lactobacillus antri strain DSM 16041
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.