STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEW53422.1Hypothetical protein. (84 aa)    
Predicted Functional Partners:
EEW54244.1
Hypothetical protein.
  
     0.721
EEW54458.1
Hypothetical protein.
  
     0.664
EEW52807.1
Putative membrane protein; Pfam: PF06612.
  
     0.623
EEW52785.1
KxYKxGKxW signal domain protein.
  
     0.563
EEW53373.1
Hypothetical protein.
  
     0.502
EEW53792.1
Hypothetical protein.
  
     0.500
EEW53421.1
Aminotransferase, class I/II; COG: COG0436; Pfam: PF00155; InterPro: IPR004839.
       0.497
EEW54343.1
Hypothetical protein.
  
     0.486
dapD
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase; Catalyzes the transfer of an acetyl group from acetyl-CoA to tetrahydrodipicolinate.
       0.485
EEW53418.1
Amidohydrolase; Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate.
       0.485
Your Current Organism:
Lactobacillus antri
NCBI taxonomy Id: 525309
Other names: L. antri DSM 16041, Lactobacillus antri DSM 16041, Lactobacillus antri str. DSM 16041, Lactobacillus antri strain DSM 16041
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.