STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pnuC-3Nicotinamide mononucleotide transporter PnuC; Pfam: PF04973; InterPro: IPR006419. (240 aa)    
Predicted Functional Partners:
EEW53193.1
Cyclic nucleotide-binding domain protein; Pfam: PF00027; InterPro: IPR014710.
 
     0.917
udp
Phosphorylase family; COG: COG2820; Pfam: PF01048; InterPro: IPR000845.
 
   
 0.896
deoB-2
Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family.
       0.773
EEW53197.1
Hypothetical protein.
       0.737
EEW54023.1
Hypothetical protein; COG: COG2972.
  
     0.586
EEW53373.1
Hypothetical protein.
  
     0.547
EEW54025.1
LytTr DNA-binding domain protein; COG: COG3279; Pfam: PF04397; InterPro: IPR007492.
  
     0.513
EEW53540.1
Hypothetical protein; COG: COG2972; Pfam: PF02518.
  
     0.469
EEW53192.1
LPXTG-motif cell wall anchor domain protein; COG: COG0154; Pfam: PF01425,PF00746; InterPro: IPR000120.
       0.461
EEW54060.1
Acetyltransferase, GNAT family; Pfam: PF00583.
  
     0.438
Your Current Organism:
Lactobacillus antri
NCBI taxonomy Id: 525309
Other names: L. antri DSM 16041, Lactobacillus antri DSM 16041, Lactobacillus antri str. DSM 16041, Lactobacillus antri strain DSM 16041
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.