STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEW52985.1Glycosyltransferase, family 8; COG: COG1442; Pfam: PF01501; InterPro: IPR002495. (274 aa)    
Predicted Functional Partners:
rfaG2
Glycosyltransferase, group 1 family protein; COG: COG0438; Pfam: PF00534; InterPro: IPR001296.
 
 
  0.795
EEW52783.1
Glycosyltransferase, group 1 family protein; COG: COG0438; Pfam: PF09318,PF00534; InterPro: IPR015397.
  
 
  0.787
EEW52651.1
Glycosyltransferase, group 1 family protein; COG: COG0438; Pfam: PF00534; InterPro: IPR001296.
  
 
  0.787
EEW52984.1
Hypothetical protein; COG: COG0640; Pfam: PF01022; InterPro: IPR011991.
       0.584
EEW52986.1
Hypothetical protein.
 
     0.583
EEW53228.1
ABC1 family protein; COG: COG0661; Pfam: PF03109; InterPro: IPR004147.
 
 
 0.552
metF
Methylenetetrahydrofolate reductase (NAD(P)H); COG: COG0685; Pfam: PF02219; InterPro: IPR003171; Belongs to the methylenetetrahydrofolate reductase family.
  
    0.418
galU
UTP--glucose-1-phosphate uridylyltransferase; COG: COG1210; Pfam: PF00483; InterPro: IPR005771.
    
  0.414
Your Current Organism:
Lactobacillus antri
NCBI taxonomy Id: 525309
Other names: L. antri DSM 16041, Lactobacillus antri DSM 16041, Lactobacillus antri str. DSM 16041, Lactobacillus antri strain DSM 16041
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.